Expertise
Hub members Have many expertise, covering most of the fields in bioinformatics and biostatistics. You'll find below a non-exhaustive list of these expertise
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Searched keyword : Single Cell
Related people (3)

Violaine SAINT-ANDRÉ
After graduating from Paris VI University with a PhD in Genetics on the “Role of histone protein post-translational modifications in splicing regulation” that I performed in the Epigenetic Regulation unit at the Institut Pasteur, I carried out two post-doctoral experiences. I first worked for three years as a postdoctoral associate of the Whitehead Institute for Biomedical Research/MIT in Cambridge (USA). My main project consisted in the integration of genomic and epigenomic data in order to predict the transcription factors that are potentially at the core of the regulation of the cell-type specific gene expression programs. I then joined the Institut Curie where I deepened my experience in multi-omics data analyses and integration to identify non-coding RNAs involved in cancer progression. I have recently joined the HUB-C3BI of the Institut Pasteur where I am performing high-throughput data integration to better understand biological complexity and contribute to precision medicine development.
KeywordsATAC-seqChIP-seqEpigenomicsNon coding RNAPathway AnalysisRNA-seqSingle CellSystems BiologyTool DevelopmentTranscriptomicsData integrationGraph theory and analysisCell biology and developmental biology
Organisms
Human
Projects (1)
Sébastien MELLA
Sébastien
KeywordsOrganisms
Projects (0)
Related projects (29)
Single cell gene expression profiling of HIV-specific CD8+ T cells associated with HIV control
Mise a disposition d'un(e) bioinformaticien(ne) du hub pour les analyses bioinformatiques du transcriptome et de l epigenome
A long-term mission for an assigned CIH-embedded bioinformatician to provide bioinformatic support to the CIH community
Development and use of statistical programs to analyze RNA-Seq data produced at the Transcriptome & Epigenome Platform
Transcriptional regulation of innate lymphoid cell plasticity versus differentiation
Characterization of the specific TCR repertoire preferentially expressed in spontaneously controlled HIV infection
Single cell analysis of HIV-specific CD4+ T cell differentiation
State and parameter inference for stochastic models of gene expression
Defining Shigella-targeting of human lamina propria mononuclear cells using CyTOF technology
Characterization of Yolk Sac Derived Progenitors in the Fetal Liver
Heterogeneity of tissue resident stromal cells
Cellular plasticity during mammary gland development
Tissue-resident stromal cell heterogeneity
Characterization of Yolk Sac Derived Progenitors in the Fetal Liver
Heterogeneity of the skeletal muscle microenvironment
Defining the differential contributions of CD4+ and CD8+ anti-CD19 CAR T cells to tumor outcome, immune recruitment and toxicity
Identification of mouse skin macrophage subpopulations
Bioinformatic analysis of paired alpha and beta T cell receptor sequences obtained at the single cell level by illumina sequencing
Shigella targeting of human colonic Lamina Propria Mononuclear Cells
Left-right patterning of heart precursors
- Anne BITON
- Rachel LEGENDRE
- Emeline PERTHAME + 1 operator