Members
Hub Members
Searched member : Damien MORNICO
Damien MORNICO
Graduated in “Structural Genomics and Bioinformatics”, I mainly worked during almost 6 years at the Genoscope (CEA) in the LABGeM team, within the microbial annotation platform MicroScope. I specifically focused on functional annotation and microbial metabolic pathways prediction and reconstruction, through pipeline implementation, database modeling and web interface development. Broadly, interactions in the MicroScope platform allowed me to tackle the whole annotation process: from genome assembly and gene prediction to network reconstruction. I also performed several comparative genomics analyses. As a member of the “Hub team”, I now take part to various projects, linked to HTS data, on different subjects (lncRNAs and stem cells, HIV integration and DNA structure, Ribosomal protein genes and genome evolution, Natural Antisense Transcripts in compact genomes…).
KeywordsData managementGenomicsSequence analysisWeb developmentDatabaseGenome analysisDatabases and ontologiesOrthology and paralogy analysisRead mappingSequence homology analysisGene predictionOrganisms
Projects (18)
- #19238 : Virulence and natural anti-sense RNA in Entamoeba histolytica, the agent of human amoebiasis (Nancy GUILLEN - Bioimage Analysis,Biology of Host-parasite Interactions) - In Progress
- #15884 : Setup of bioinformatic pipelines for paleo(meta)genomics (Nicolás RASCOVAN - Department of Genomes and Genetics) - In Progress
- #13406 : Multiparametric immunophenotyping of whole blood in IFN-treated multiple sclerosis patients (Priyanka DEVI - Cytokine Signaling) - Closed
- #12992 : Genomic DNA sequencing of Burkholderia ambifaria Q53 strain isolated from peanut rizospheric soil (Mathilde BEN ASSAYA - Structural Microbiology) - Closed
- #12767 : Comparative genomics of Helicobacter pylori bismuth resistant strains (Hilde DE REUSE - Helicobacter Pathogenesis) - Awaiting Publication
- #12647 : Sequence analysis of Mycobacterium marinum mutants (Mena CIMINO - Department of Genomes and Genetics) - Closed
- #11975 : Analyse d’expression de gènes de la réponse immune par voies fonctionnelles (Frédérique MICHEL - Other) - Closed
- #10700 : Genomic determinants for initiation and length of natural antisense transcripts in a compact eukaryotic genome and phylogenetic analysis of related Entamoeba species (Nancy GUILLEN - Biology of Host-parasite Interactions) - Closed
- #10297 : viral evolution around Ebola Treatment Center in Macenta (Caroline PICARD - Viral Populations and Pathogenesis) - Closed
- #8363 : Analyse génomique de corynebacterie (Mathilde BEN ASSAYA - Department of Structural Biology & Chemistry) - Closed
- #7968 : Extraction of sequence information from published genomes of commensal bacteria (Pamela SCHNUPF - Molecular Microbial Pathogenesis) - Closed
- #7930 : Gene expression profiling in Kupffer cells (Yu WEI - Hepacivirus and Innate Immunity) - Awaiting Publication
- #6826 : Regulation of HIV-1 integration selectivity by chromatin (Marc LAVIGNE - Department of Virology) - In Progress
- #2720 : How ribosomal protein gene position impacts in the genome evolution during a long term evolution experiment. (Alfonso SOLER - Bacterial Genome Plasticity) - Awaiting Publication
- #2456 : Transfert annotations (Christiane BOUCHIER - Genomics) - Closed
- #2436 : Identification of new cellular parameters involved in HIV-1 integration selectivity (Marc LAVIGNE - Molecular Virology and Vaccinology) - Closed
- #2426 : Formatage et soumission de données à l'EBI (Guilhem JANBON - Fungal Biology and Pathogenicity) - Closed
- #2391 : gRNA library design (Pablo NAVARRO GIL - Epigenetics of Stem Cells) - Closed
