Hugo VARET

Hugo Varet is a biostatistician engineer from the Ensai (Ecole Nationale de la Statistique et de l’Analyse de l’Information) and has been recruited by the hub of the C3BI (Center of Bioinformatics, Biostatistics and Integrative Biology) to work at the Transcriptome & Epigenome Platform. He is in charge of the statistical analyses of the RNA-Seq data produced by the platform and develops R pipelines that help in this task. One of them is named SARTools and is available on GitHub: https://github.com/PF2-pasteur-fr/SARTools.

• #13376 : Antiviral activities of anti-HIV-1 antibodies (Timothée BRUEL - Virus and Immunity) - In Progress
• #11642 : Defining Shigella-targeting of human lamina propria mononuclear cells using CyTOF technology (Katja BRUNNER - Molecular Microbial Pathogenesis) - Closed
• #11514 : Exploring immunological mechanisms of human graft-verus-host disease after hematopoietic stem cell transplantation (Eleonora LATIS - Immunoregulation) - Closed
• #8727 : Functional interactions between HP1 proteins and RNA. (Christophe RACHEZ - Epigenetic Regulation) - Closed
• #8263 : Performing Gene Ontology Analysis on RNAseq data in Aedes aegypti (Sarah MERKLING - Insect-Virus Interactions) - Awaiting Publication
• #8202 : Transcriptomic analysis of blood cells from ebola infected patients (Stéphanie REYNARD - Biology of Viral Emerging Infections) - Closed
• #7277 : optimisation d\'un programme sous R (Pierre-Henri COMMERE - Other) - Closed
• #6272 : Host gene regulation in response to Listeria monocytogenes infection (DAVID RIBET - Bacteria-Cell Interactions) - Closed
• #4173 : Gene Expression analysis (DULAUROY SOPHIE - Microenvironment and Immunity) - Closed
• #3905 : Development and use of statistical programs to analyze RNA-Seq data produced at the Transcriptome & Epigenome Platform (Jean-Yves COPPÉE - Transcriptome and EpiGenome) - Closed
• #3883 : Development and use of statistical programs to analyze RNA-Seq data produced at the Transcriptome & Epigenome Platform (Jean-Yves COPPÉE - Transcriptome and EpiGenome) - Closed
• #3254 : ANALYSIS OF TRANSCRIPTIONAL MODULATIONS RELATED TO CELL DEATH PROCESSES IN MURINE BONE-MARROW DERIVED MACROPHAGES AND DENDRITIC CELLS INFECTED BY LEISHMANIA AMAZONENSIS (Hervé LECOEUR - Molecular Parasitology and Signaling) - Closed
• #2622 : MicrocystOmics (Claire PANCRACE - Collection of Cyanobacteria) - Closed
• #2526 : Analyse de données de microarray (Yu WEI - Hepacivirus and Innate Immunity) - Closed
• #2263 : HIghthroughput CRISPR-Cas9 screen in bacteria (David BIKARD - Synthetic Biology) - Closed
• #2243 : Characterisation of skeletal muscle stem cell properties in distinct physiological states (Francesca PALA - Stem Cells And Development) - Closed
• #244 : Mapping the cell surface signature of the developing mouse heart (Mariana VALENTE - Lymphopoiesis) - Closed