Nicolas MAILLET

After a PhD in bioinformatics at Inria/IRISA, Université de Rennes 1, Rennes (France), under the supervision of Dominique Lavenier and Pierre Peterlongo, I did a postdoc in bioinformatics at Laboratory of Ecology and Evolution of Plankton in Stazione Zoologica Anton Dohrn of Naples, Italy. Both my thesis and my postdoc were about the Tara Oceans projet and the development of new software to analyze huge quantities of raw reads coming from metagenomics sample. I am currently occupying a research engineer position at the Hub as leader of ALPS group and focus on several different computing problems including metagenomics, protein assembly and several short term developments.

• #12257 : Analysis of neuronal population dynamics in rodents during virtual navigation (Christoph SCHMIDT-HIEBER - Neural circuits for spatial navigation and memory) - Pending
• #7917 : Recombination among enteroviruses (Maël BESSAUD - Biology of Enteric Viruses) - Pending
• #6333 : Identification of new or unexpected pathogens, including viruses, bacteria, fungi and parasites associated with acute or progressive diseases (Marc ELOIT - Biology of Infection) - In Progress
• #5034 : Environmental and human surveillance of polioviruses, VDPVs, and other enteroviruses in Madagascar during the switch from tOPV to bOPV (Patsy POLSTON - Biology of Enteric Viruses ) - Closed
• #3327 : Listeriomics - Development of a web platform for visualization and analysis of Listeria omics data (Pascale COSSART - Bacteria-Cell Interactions) - Closed
• #3127 : Interactions and dynamics of fungal and bacterial microbiome in healthy people (Marie-Elisabeth BOUGNOUX - Fungal Biology and Pathogenicity) - Closed
• #2944 : Antibody sequencing by MS: Automation of analysis (Bertrand SAUNIER - Structural Virology) - In Progress
• #2875 : Do faecal microbiome phages facilitate antibiotic resistance? (Eduardo ROCHA - Microbial Evolutionary Genomics) - In Progress