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Project #3883
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#3883 : Development and use of statistical programs to analyze RNA-Seq data produced at the Transcriptome & Epigenome Platform
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Name of Applicant : Jean-Yves Coppée
Date of application : 26-02-2015
Unit : Transcriptome and EpiGenome
Location : Biotop (2eme)
Phone : 01 45 68 86 51
@ Mail : jycoppee@pasteur.fr

Project context and summary :

The Transcriptome & Epigenome Platform is dedicated to the development and use of high throughput approaches for transcriptomics and epigenomics studies. The platform is accessible to any research team from the Pasteur Institute (80% of the projects) as well as from outside. It is involved (most often as collaborator) in several projects funded by the ANR, AVIESAN and by the Pasteur Institute in the framework of the PTR programs. Next Generation Sequencing (NGS) based on the Illumina technology (HiSeq 2000/2500 sequencers) is used to perform RNA-sequencing experiments for which a large amount of data is generated. After a first step involving bioinformatics, specific statistical methods must be used be analyze rigorously the data. These analyses are most often performed by the statistician(s) of the platform. They are also in charge of bibliographical survey activity.


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Service Delivery
Project Manager : hugo.varet@pasteur.fr
Project Type : Mis-a-disposition
Status : Closed


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