Project

Project #9762
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Topics :

Comparative Genomics Genome assembly Variant analysis

Organisms :

Fungi

Group :

FUNGEN

Name of Applicant : Marie Desnos-Ollivier
Date of application : 25-09-2017
Unit : Molecular Mycology
Location : 03-RH-04A
Phone : +33141613341
@ Mail : mdesnos@pasteur.fr
@ PI-Mail : dromer@pasteur.fr

Project context and summary :

Trichosporon asahii is a yeast responsible of human invasive infection worldwide. Actually, no genotyping method is available to determine relationship between clinical isolates. At the NRCMA we have more than 40 clinical isolates and 2 collection strains associated with clinical data. Thanks to P2M facility, whole genome for 33 isolates was sequenced. The aim of this project is to study the genetic diversity of Trichosporon asahii and the potential relationship with clinical and/or phenotypic data and finally propose a new genotyping method that could be usefull for clinician in case of local or national outbreak.

Related team publications :

Project Manager : corinne.maufrais@pasteur.fr
Project Type : Short
Status : In Progress

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